Yes, I've come across this before. In the case I recall, the chap getting married left the family home a few years earlier and joined the army. This happened shortly before his widowed father remarried. It is always possible he was not happy about someone taking his mum's place, so fell out with his dad, but who knows.
There could be numerous other reasons for such an occurrence, eg groom brought up not knowing father so assumed he was dead, etc.